SamplingSite

Class: SamplingSite

Modified

August 19, 2024

Documentation of the site where the sample was collected, wtih place name(s) and a geospatial location.

URI: isam:SamplingSite

case 4

%%{init: {'securityLevel': 'loose', 'theme':'neutral', 'themeVariables': { 'fontSize':'14px', 'fontFamily':'Roboto Mono'}}}%%
classDiagram
    direction RL
    class SamplingSite {
      description : string
      identifier : uriorcurie
      is_part_of : uriorcurie[]
      label : string
      place_name : string[]
      sample_location : GeospatialCoordLocation
      
    }
    
    
    
    
    
    GeospatialCoordLocation --o SamplingSite : sample_location
      click GeospatialCoordLocation href "GeospatialCoordLocation.html" "Documentation"
      
    
    
    
    
    SamplingSite --o SamplingEvent : sampling_site
       click SamplingEvent href "SamplingEvent.html" "Documentation"
      
    

Slots

Slots in class SamplingSite.
Name Cardinality and Range Description Inheritance
identifier 0..1
xsd:anyURI
A string that identifies some resource. Expectation is that it is a URI that is resolvable to some useful represenation of the resource.
direct
description 0..1
xsd:string
Free text description of the subject of a triple.
direct
label 0..1
xsd:string
A human intelligible string used to identify a thing, i.e. the name to use for the thing; should be unique in the scope of a sample collection or dataset.
direct
sample_location 0..1
GeospatialCoordLocation
Geopatial location of site; required default is WGS84 latitude, longitude in decimal degrees. Elevation as a string with number, unit of measure, and datum.
direct
place_name 0..*
xsd:string
One or more names by which the sampling site is known.
direct
is_part_of 0..*
xsd:anyURI
A link from a SamplingSite to a larger sampling site that spatially contains the source SamplingSite. The container site is specified by its identifier.
direct

Usages

used by used in type used
SamplingSite sample_location domain SamplingSite
SamplingSite place_name domain SamplingSite
SamplingSite is_part_of domain SamplingSite
SamplingEvent sampling_site range SamplingSite

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/isample/schema/1.0

Mappings

Mapping Type Mapped Value
self [‘isam:SamplingSite’]
native [‘isam:SamplingSite’]

LinkML Source

Direct

name: SamplingSite
description: 'Documentation of the site where the sample was collected, wtih place
  name(s) and a geospatial location.

  '
from_schema: https://w3id.org/isample/schema/1.0
rank: 1000
slots:
- identifier
- description
- label
- sample_location
- place_name
- is_part_of

Induced

name: SamplingSite
description: 'Documentation of the site where the sample was collected, wtih place
  name(s) and a geospatial location.

  '
from_schema: https://w3id.org/isample/schema/1.0
rank: 1000
attributes:
  identifier:
    name: identifier
    description: 'A string that identifies some resource. Expectation is that it is
      a URI that is resolvable to some useful represenation of the resource.

      '
    from_schema: https://w3id.org/isample/schema/1.0
    domain: IdentifierObject
    alias: identifier
    owner: SamplingSite
    domain_of:
    - Agent
    - IdentifierObject
    - SamplingSite
    - SamplingEvent
    - MaterialSampleCuration
    range: uriorcurie
  description:
    name: description
    description: 'Free text description of the subject of a triple.

      '
    from_schema: https://w3id.org/isample/schema/1.0
    close_mappings:
    - dct:description
    alias: description
    owner: SamplingSite
    domain_of:
    - MaterialSampleRecord
    - SamplingSite
    - SamplingEvent
    - MaterialSampleCuration
    - SampleRelation
    range: string
  label:
    name: label
    description: 'A human intelligible string used to identify a thing, i.e. the name
      to use for the thing; should be unique in the scope of a sample collection or
      dataset.

      '
    from_schema: https://w3id.org/isample/schema/1.0
    close_mappings:
    - rdfs:label
    alias: label
    owner: SamplingSite
    domain_of:
    - MaterialSampleRecord
    - IdentifierObject
    - SamplingSite
    - SamplingEvent
    - MaterialSampleCuration
    - SampleRelation
    range: string
  sample_location:
    name: sample_location
    description: 'Geopatial location of site; required default is WGS84 latitude,
      longitude in decimal degrees. Elevation as a string with number, unit of measure,
      and datum.

      '
    from_schema: https://w3id.org/isample/schema/1.0
    domain: SamplingSite
    alias: sample_location
    owner: SamplingSite
    domain_of:
    - SamplingSite
    range: GeospatialCoordLocation
  place_name:
    name: place_name
    description: 'One or more names by which the sampling site is known.

      '
    from_schema: https://w3id.org/isample/schema/1.0
    domain: SamplingSite
    alias: place_name
    owner: SamplingSite
    domain_of:
    - SamplingSite
    range: string
    multivalued: true
  is_part_of:
    name: is_part_of
    description: 'A link from a SamplingSite to a larger sampling site that spatially
      contains the source SamplingSite.  The container site is specified by its identifier.

      '
    from_schema: https://w3id.org/isample/schema/1.0
    close_mappings:
    - sdo:isPartOf
    domain: SamplingSite
    alias: is_part_of
    owner: SamplingSite
    domain_of:
    - SamplingSite
    range: uriorcurie
    multivalued: true